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This version published online on October 26, 2004
Journal of Clinical Endocrinology & Metabolism , doi:10.1210/jc.2004-1768
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*LIOTHYRONINE

Submitted on September 4, 2004
Accepted on October 15, 2004

Thyroid Hormone Responsive Genes in Cultured Human Fibroblasts

LARS C. MOELLER, ALEXANDRA M. DUMITRESCU, ROBERT L. WALKER, PAUL S. MELTZER, and SAMUEL REFETOFF*

Department of Medicine (L.C.M., S.R.), Pediatrics (S.R.) and Human Genetics (A.M.D.), Committees on Genetics and Molecular Medicine (S.R.) The University of Chicago, Chicago, IL and Cancer Genetics Branch (R.L.W., P.S.M.), National Human Genome Research Institute, NIH, Bethesda, MD

* To whom correspondence should be addressed.
SAMUEL REFETOFF, E-mail: refetoff{at}uchicago.edu

Human skin fibroblasts are readily accessible cells for propagation in culture without transformation, that can serve for direct pathophysiology studies in subjects with inherited diseases. We thus examined by quantitative fluorescent cDNA microarray analysis the effect of thyroid hormone (TH) on the expression of over 15,000 genes in fibroblasts of two normal individuals. Fibroblasts from two subjects with resistance to thyroid hormone (RTH) due to mutations in the TH receptor (TR) {beta} gene were used to confirm the specificity of the hormonal effect by the ability to discriminate between normal cells and cells with a defect in TH action. Microarray analysis identified 148 genes induced by ≥1.4-fold and 5 genes repressed to ≤ 0.7, 24 h after treatment with 2x10-9M T3. Taking into account duplicate genes these represented 91 upregulated and 5 downregulated genes, respectively. Confirmation by real-time PCR was obtained in 8 of 10 induced and 2 of 3 repressed genes that were tested. Further evidence for T3 specific induction was provided by a graded dose response absent in fibroblasts from the patients with RTH. The following genes not previously known to be induced by TH were identified and validated: AKR1 C1-3, COL6A3, RAB3B, PFKP, HIF-1{alpha} and ENO1. These genes as well as three known to be TH regulated in other species and found in this study also in human cells (GLUT1, SLC16A3 and BTEB1) have a variety of regulatory functions in development and metabolism. TH seems to induce these genes by initiating either genomic or non-genomic mechanisms. Surprisingly, TH-mediated downregulation of FGF7 and ADH1B persisted in fibroblasts from patients with RTH.

This first systematic study of TH-mediated gene expression in normal human cells identifies several new TH-responsive genes and demonstrates that skin fibroblasts are suitable for the study of TH action in health and in disease.


Key words: microarray • real-time PCR • RTH • non-genomic action • signaling pathways




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