| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
Department of Preventive Medicine, Keck School of Medicine, University of Southern California (C.A.H., S.E.R., V.W.S., D.V.C.), Los Angeles, California 90089; Broad Institute of Massachusetts Institute of Technology and Harvard (M.L.F.), Cambridge, Massachusetts 02139; Departments of Medicine, Molecular Biology, and Hematology/Oncology, Massachusetts General Hospital (M.L.F.), Boston, Massachusetts 02114; and Etiology Program, Cancer Research Center of Hawaii, University of Hawaii (L.L.M.), Honolulu, Hawaii 96813
Address all correspondence and requests for reprints to: Dr. Christopher Haiman, University of Southern California/Norris Comprehensive Cancer Center, 1441 Eastlake Avenue, Los Angeles, California 90089. E-mail: haiman{at}usc.edu.
| Abstract |
|---|
|
|
|---|
0.08). In analysis of the repeat polymorphism, SHBG levels among carriers of two short alleles (seven or fewer repeats; 31.2 nmol/liter; 95% CI, 27.335.6; n = 82) were not statistically different from those of carriers of two long alleles (more than seven repeats; 32.7 nmol/liter; 95% CI, 29.436.3; n = 124; P = 0.59). We did, however, observe individual genotypic classes (n = 16) to contribute modestly to the overall prediction of SHBG levels (by analysis of covariance, P = 0.03). Carriers of the six-repeat allele (27.9 nmol/liter; 95% CI, 25.230.8; n = 147) were found to have nominally significantly lower SHBG levels than noncarriers (32.4 nmol/liter; 95% CI, 29.735.2; n = 202; P = 0.03). This effect was stronger among the subset of women who also carried the Asn327 allele (interaction, P = 0.006). In summary, these results suggest that genetic variation at the SHBG locus may contribute to modest differences in SHBG levels among healthy postmenopausal women, and that much larger studies will be needed to better comprehend the effects of common variations at this locus in predicting circulating SHBG levels. | Introduction |
|---|
|
|
|---|
Functional genetic variation at the SHBG gene locus may contribute to our understanding of these SHBG-linked disorders by serving as surrogate markers of circulating SHBG levels and long-term exposure to biologically important steroid hormones, estradiol and testosterone. Recently, a pentanucleotide repeat polymorphism (TAAAA)n in the 5' promoter region of the SHBG gene has been characterized (17, 18, 19), with alleles varying from six to 11 TAAAA repeats. Hogeveen et al. (17) reported the six-TAAAA allele to be associated with decreased transcriptional activity in an in vitro assay tested in hepatoblastoma cells (17). The relationship between this polymorphism and circulating SHBG levels has been examined in three separate studies of premenopausal women with PCOS (18) and hirsutism, (19) and of young men (20). In contrast to the in vitro results, all of these studies found that individuals with shorter (TAAAA)n repeat genotypes had significantly higher circulating SHBG levels. Whether this polymorphic repeat contributes to interindividual differences in SHBG levels among postmenopausal women without common endocrine disorders has yet to be determined.
Additional variants in SHBG have also been detected and evaluated as predictors of SHBG levels (19, 21, 22). A common missense single nucleotide polymorphism in exon 8 (Asp327Asn; frequency, 515%) (22, 23) is thought to introduce an N-glycosylation site and result in a decreased rate of clearance of SHBG (24). This variant (Asn327 allele) has been found to be in strong linkage disequilibrium (LD) with the eight-TAAAA allele, and two studies that have investigated this single nucleotide polymorphism have found carriers of the less common Asn327 allele to have lower circulating SHBG levels (19, 22).
In the present study we extend these previous observations by evaluating the frequency of the pentanucleotide repeat and Asp327Asn missense polymorphisms in the SHBG gene among African-American, Native Hawaiian, Japanese, Latina, and white postmenopausal women in the Multiethnic Cohort Study (MEC) and investigated whether specific alleles at this locus predict circulating SHBG levels in these healthy women.
| Subjects and Methods |
|---|
|
|
|---|
Women in this study are participants in the MEC (25), a large prospective cohort consisting of over 215,000 men and women from Hawaii and California (mainly Los Angeles). In brief, the cohort is comprised predominantly of Native Hawaiians, Japanese, and whites in Hawaii and African-Americans, Japanese, and Latinos in Los Angeles. Between 1993 and 1996, participants entered the MEC by completing a 26-page, self-administered questionnaire that asked detailed information about dietary habits, demographic factors (ethnicity, education, and migrant status), personal behaviors (smoking, sun exposure, and physical activity), history of prior medical conditions (e.g. heart attack, diabetes, and cancer), and, for women, reproductive history and exogenous hormone use. No personal information was collected regarding specific endocrine conditions, such as hirsutism or PCOS. Potential cohort members were identified through the Department of Motor Vehicles drivers license files and, additionally for African-Americans, Health Care Financing Administration data files. The participants were between the ages of 45 and 75 yr when they entered the cohort.
Beginning in 1994, blood samples were collected from a random sample of MEC participants to serve as a control pool for genetic association studies in the cohort. Blood samples were collected at the participants homes after an overnight fast, processed within 8 h, and stored at 80 C. Four hundred and fifty-four postmenopausal women were originally selected for hormone analysis (100 African-Americans, 78 Native Hawaiians, 92 Japanese, 97 Latinas, and 87 whites). Participants provided their informed consent, and the protocol was approved by the institutional review boards at the University of Southern California and the University of Hawaii.
Hormone assay
SHBG levels were measured by an immunoradiometric assay (Cis-Bio, Gif-sur-Yvette, France) in 14 separate batches. The number of women from each ethnic group was evenly distributed across the batches. Analyses were performed in the Hormone and Cancer Group laboratory at the International Agency for Research on Cancer (Lyon, France). The intra- and interbatch laboratory coefficients of variation calculated from blind duplicate samples were 2.9% and 13.6%, respectively.
Genotyping of the (TAAAA)n and Asp327Asn polymorphisms
DNA was extracted from the buffy coat fraction using the QIAGEN 96 DNA Spin Kit (QIAGEN, Valencia, CA). Genotyping of the (TAAAA)n was performed as follows. PCR amplification of the fragment was generated using primers 5'-GATCGCTTGAACTCGAGAGG-3' (forward) and 5'-GCCTGTCTCCCAAGAAGGTA-3' (reverse). This resulted in a PCR product of 275 bp (eight TAAAA repeats). Two forward primers were used in the reaction: one 5'-labeled with a fluorescent dye, and one without. Thirty nanograms of genomic DNA were used per 20 µl reaction with 200 nmol of each forward and reverse primer (180 nmol unlabeled and 20 nmol 5'-labeled forward primers), 25 mM MgCl2, 10 mM deoxy-NTPs, 10x QIAGEN PCR buffer, and 0.5 U QIAGEN HotStarTaq (QIAGEN). Amplification conditions were 5 min of initial denaturation at 95 C, followed by 40 cycles of 1 min at 95 C, 1 min at 60 C, and 1 min at 72 C, and a final extension of 10 min at 72 C. Fragment length was determined using the ABI 3700 DNA analyzer (Applied Biosystems, Foster City, CA). Amplified products were evaluated relative to Genescan-500 [Rox] size standard using Genescan and Genotyper software (Applied Biosystems). Twenty-three samples did not amplify and were excluded from the analysis of the TAAAA polymorphism.
Genotyping of the Asp327Asn polymorphism was performed by the 5'-nuclease TaqMan allelic discrimination assay (Applied Biosystems) as follows. PCR amplification of the fragment was generated using primers 5'-AATGCTCTAATGCCACCTTTGC-3' (forward) and 5'-TGCCCAAAGGCCATTCAG-3' (reverse). Five nanograms of genomic DNA were used per 5 µl reaction, which included 0.0625 µl 80x custom primer/probe mix (Applied Biosystems), which contained the primers and 6-carboxyfluorescein- and VIC-labeled probes (6-carboxyfluorescein, 5'-TCTAGGAGAAAACTCT-3'; VIC, 5'-CTCTAGGAGAAGACTC-3'), 2.5 µl TaqMan Universal PCR Master Mix (Applied Biosystems), and 2.44 µl water. Amplification conditions were 10 min of initial denaturation at 95 C, followed by 50 cycles of 15 sec at 95 C and 1 min at 60 C. Ten replicate samples were inserted to assess quality control, and the concordance of genotyping calls for both the TAAAA and Asp327Asn polymorphisms was 100%.
Statistical analysis
Because SHBG levels have been found to be lower in women with breast cancer, to decrease the variability in the SHBG values we excluded women with a history of breast cancer (n = 59). In addition, one woman missing body mass index (BMI) measurement, one woman who self-reported taking hormone replacement therapy at the time of blood sampling, and 22 women who had estradiol values above 100 pg/ml at the time of blood sampling, indicating hormone replacement therapy use or premenopausal status, were also excluded. The natural logarithm of the plasma SHBG values was used to reduce the skewness. After this transformation, only two subjects had values more than 1.5 times the interquartile range (both had values <7.0 nmol/liter). The removal of these women from the analysis had no bearing on the final results. ANOVA and analysis of covariance (ANCOVA) were used to test for differences between the ethnic groups with regard to demographic factors and SHBG levels. For demographic factors, results are provided as the mean ± SD. Least-squares geometric mean SHBG levels were calculated for each ethnic group, and by SHBG genotype [(TAAAA)n and Asp327Asn], using multiple regression methods while adjusting for age (continuous), BMI (continuous), and laboratory batch; adjustment for these factors as categorical variables produced similar results. Other potential predictors of SHBG levels (age at menarche, alcohol intake and smoking status) did not alter the results and thus were not included in the final models. Ninety-five percent confidence intervals (95% CIs) were calculated for mean SHBG values to allow comparison between ethnic groups and genotype classes.
To assess the relationship between the repeat polymorphism and SHBG levels, we performed analyses similar to those described by Xita et al. (18) and Cousin et al. (19). First, we performed a cut-point sensitivity analysis and evaluated SHBG levels between individuals with two short-repeat vs. two long-repeat alleles (e.g. both alleles with seven or fewer repeats vs. both alleles with more than seven repeats). Second, we evaluated SHBG levels by specific SHBG repeat genotypes; we observed 16 of the 36 possible combinations of alleles. Lastly, to assess whether a specific repeat allele may be functional or a marker in LD with a functional variant located elsewhere in the gene, we evaluated differences in SHBG levels between carriers and noncarriers of each allele [e.g. noncarriers of the six-repeat allele (no 6) vs. heterozygotes (6/X) and homozygotes (6/6)]. A similar analysis was conducted for the Asp327Asn polymorphism. For both polymorphisms, gene dosage was also evaluated by modeling genotype as an ordinal variable. LD between the (TAAAA)n and Asp327Asn alleles was evaluated for each ethnic group using the
2 test. We explored the potential interaction between TAAAA repeat alleles and the Asp327Asn polymorphism by including interaction terms between carriers and noncarriers of specific alleles in multivariate linear regression models. Two-sided tests were conducted, and P < 0.05 was considered statistically significant. For all analyses, we used SAS statistical package version 8.2 (SAS Institute, Inc., Cary, NC).
| Results |
|---|
|
|
|---|
0.12). As expected, heavier women (BMI,
25 kg/m2) in all groups had lower SHBG levels (Table 1
|
|
0.15). The eight-repeat allele was the most common allele among African-Americans (0.47), whereas the nine-repeat allele was the most common among Japanese (0.39). The seven-repeat allele was the most common allele among Native Hawaiians (0.38) and Latinas (0.29) and was relatively rare among African-Americans and whites (0.06). The 10-repeat allele was of low frequency in all populations (frequencies, <0.09). The 11-repeat allele was extremely rare; we observed only three white women to be carriers.
|
|
|
|
As observed in other white populations (19), we found the eight-repeat allele and the Asn327 allele to be in LD. Evidence of this relationship was noted in all populations (whites, P = 0.005; Latinas, P < 0.0001; Native Hawaiians, P = 0.03; Japanese, P = 0.08), except African-Americans (P = 0.49). Next, we explored the combined effects of the six-repeat allele and the Asn327 allele in predicting SHBG levels (Table 6
). The test for interaction between carriers and noncarriers of the six-repeat allele and the Asn327 allele was statistically significant (P = 0.006). Compared with noncarriers of the six-repeat allele and the Asn327 allele (31.8 mol/liter; 95% CI, 29.035.0; n = 159), carriers of both of these alleles had significantly lower SHBG levels (20.6 mol/liter; 95% CI, 14.728.7.0; n = 13; P = 0.01). Although preliminary, these data suggest that the association observed with the six-repeat allele may be stronger among, and perhaps limited to, those who also carry the Asn327 allele.
|
| Discussion |
|---|
|
|
|---|
Previous studies have suggested that interindividual differences in circulating SHBG levels may in part be genetically determined (18, 19, 20, 21, 22, 26). Three previous studies have examined the SHBG (TAAAA)n repeat polymorphism in relation to SHBG levels, and in all three of these studies, individuals with longer repeat alleles were reported to have significantly lower circulating SHBG levels than those with shorter repeat alleles (18, 19, 20). Xita et al. (18) examined the association between the (TAAAA)n repeat polymorphism and PCOS and its relation to SHBG levels among Greek women with PCOS (n = 185) and ethnically matched controls (n = 324). They observed that women with PCOS were more likely to be carriers of longer (TAAAA)n repeat alleles (more than eight repeats) compared with controls (P = 0.03). Among women with PCOS, they also found that carriers of two long-repeat alleles (eight or more repeats; n = 92) had significantly lower SHBG levels (22.5%; P = 0.02) compared with women homozygous for two short alleles (fewer than eight repeats; n = 47). This difference, however, was not observed in the premenopausal control women (n = 324). Cousin et al. (19) also examined whether the (TAAAA)n repeat polymorphism influences SHBG levels among hirsute women (n = 303). In this sample, comprised mainly of white French women, they observed women with the 9/9 repeat genotype (n = 21) to have significantly lower SHBG levels than women with the 6/6 genotype (n = 8; 38.4%; P = 0.04). In a more recent study among 993 young men, Wood et al. (20) reported carriers of longer repeat alleles to have lower serum SHBG levels. These findings support those previously reported among women (18, 19). However, these previous studies are contrary to expectation based on the in vitro results, where the six-allele was the only allele with lower transcriptional activity (17). In addition, a direct comparison of the results across these three previous studies is difficult, because each study grouped SHBG repeat genotype classes differently in their analyses. Based on the previous clinical studies among premenopausal women as well as the present report, one may infer that SHBG production through this (TAAAA)n repeat polymorphism may be differentially regulated between women depending on their androgenic status. Hogeveen et al. (17) identified a nuclear factor that was found to bind to the six-TAAAA allele and silence SHBG transcription in hepatoma cells. This in vitro result supports our findings that women with the six-repeat allele may have lower SHBG levels. Additional work will be required to characterize this factor and to understand under what conditions (i.e. high androgen levels) it interacts with this repeat polymorphism and is regulated.
Two recent studies have reported the Asn327 allele of the Asp327Asn polymorphism to be associated with higher circulating SHBG levels. Among hirsute women, Cousin et al. (19) reported both heterozygous (n = 52) and homozygous (n = 2) carriers of the Asn327 allele to have higher SHBG levels than women with the Asp/Asp genotype (n = 249; P = 0.01 for trend). In a more recent study by Dunning et al. (22), among 1975 postmenopausal women from the United Kingdom, the Asn327 allele was found to explain only 0.6% of the variance in SHBG levels in the population (P = 0.005). We also found weak evidence that carriers of the Asn327 allele may have higher circulating SHBG levels, which is consistent with these previous studies as well as a laboratory study that found the human variant SHBG protein to have a lower clearance rate in rabbits (24). Although preliminary, we also found suggestive evidence that the association we observed with the six-repeat allele may depend on Asn327 carrier status, because the inverse relationship between the six-repeat allele and SHBG levels was more apparent among Asn327 allele carriers. One possible explanation may be that down-regulation of SHBG production via the six-repeat allele may be enhanced among women with modestly higher circulating SHBG levels (i.e. Asn327 carriers). Based on our limited sample size, however, it is also possible that the associations we observed with the six-repeat allele and the suggestive interaction with the Asn327 allele may be false positives.
Additional variants in SHBG have been detected and evaluated as predictors of SHBG levels (19, 21, 22). Dunning et al. (22) reported a second polymorphism in the 5'-untranslated region to be highly statistically significantly associated with SHBG levels (P < 106) and account for as much as 2.4% of the variance. This 5'-untranslated region polymorphism does not appear to be inherited on the same haplotype as the Asn327 allele (22), and it is presently not known whether this polymorphism is linked with a specific repeat allele. LD-based studies in multiple populations that include the TAAAA repeat polymorphism as well as other known common variants will be required to better understand the independent and joint effects of putative functional variation in the SHBG gene. Rare missense variants in SHBG have also been identified, one in exon 4 (P156L) and two in exon 1 (R25H, R25C; www.genome.wi.mit.edu/cvar_snps) (21). Hogeveen et al. (21) found the rare L156 variant in five patients with hyperandrogenism and ovarian dysfunction, whereas the influence of the two extremely rare missense variants in exon 1 on SHBG levels has not been studied.
In summary, our data suggest that the (TAAAA)6 repeat allele of the SHBG gene may be associated with modestly lower circulating SHBG levels in healthy postmenopausal women. Our sample size within each ethnic group, however, is not large enough to definitively evaluate modest ethnic-specific effects, and larger studies evaluating the combined effects of TAAAA repeat alleles and the Asp327Asn polymorphisms are needed. A comprehensive LD-based approach will be required to clarify the contribution of genetic variation in SHBG to lifetime exposure to androgens and estrogens and risk of SHBG-linked disorders.
| Acknowledgments |
|---|
| Footnotes |
|---|
First Published Online January 5, 2005
Abbreviations: ANCOVA, Analysis of covariance; BMI, body mass index; CI, confidence interval; PCOS, polycystic ovarian syndrome.
Received July 19, 2004.
Accepted December 28, 2004.
| References |
|---|
|
|
|---|
This article has been cited by other articles:
![]() |
A. Turk, P. Kopp, L. A. Colangelo, M. Urbanek, K. Wood, K. Liu, H. G. Skinner, and S. M. Gapstur Associations of Serum Sex Hormone Binding Globulin (SHBG) Levels with SHBG Gene Polymorphisms in the CARDIA Male Hormone Study Am. J. Epidemiol., February 15, 2008; 167(4): 412 - 418. [Abstract] [Full Text] [PDF] |
||||
![]() |
B. L. Yaspan, J. P. Breyer, Q. Cai, Q. Dai, J. B. Elmore, I. Amundson, K. M. Bradley, X.-O. Shu, Y.-T. Gao, W. D. Dupont, et al. Haplotype Analysis of CYP11A1 Identifies Promoter Variants Associated with Breast Cancer Risk Cancer Res., June 15, 2007; 67(12): 5673 - 5682. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. I. Berndt, N. Chatterjee, W.-Y. Huang, S. J. Chanock, R. Welch, E. D. Crawford, and R. B. Hayes Variant in Sex Hormone-Binding Globulin Gene and the Risk of Prostate Cancer Cancer Epidemiol. Biomarkers Prev., January 1, 2007; 16(1): 165 - 168. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. L. Eriksson, M. Lorentzon, D. Mellstrom, L. Vandenput, C. Swanson, N. Andersson, G. L. Hammond, J. Jakobsson, A. Rane, E. S. Orwoll, et al. SHBG Gene Promoter Polymorphisms in Men Are Associated with Serum Sex Hormone-Binding Globulin, Androgen and Androgen Metabolite Levels, and Hip Bone Mineral Density J. Clin. Endocrinol. Metab., December 1, 2006; 91(12): 5029 - 5037. [Abstract] [Full Text] [PDF] |
||||
![]() |
V. W. Setiawan, C. A. Haiman, F. Z. Stanczyk, L. Le Marchand, and B. E. Henderson Racial/Ethnic differences in postmenopausal endogenous hormones: the multiethnic cohort study. Cancer Epidemiol. Biomarkers Prev., October 1, 2006; 15(10): 1849 - 1855. [Abstract] [Full Text] [PDF] |
||||
![]() |
N. Xita, A. Tsatsoulis, I. Stavrou, and I. Georgiou Association of SHBG gene polymorphism with menarche Mol. Hum. Reprod., June 1, 2005; 11(6): 459 - 462. [Abstract] [Full Text] [PDF] |
||||
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
| Endocrinology | Endocrine Reviews | J. Clin. End. & Metab. |
| Molecular Endocrinology | Recent Prog. Horm. Res. | All Endocrine Journals |