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The Journal of Clinical Endocrinology & Metabolism Vol. 86, No. 3 1394-1397
Copyright © 2001 by The Endocrine Society


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Analysis of the P3 Promoter of the Human Parathyroid Hormone (PTH)/PTH-Related Peptide Receptor Gene in Pseudohypoparathyroidism Type 1b1

Masanori Minagawa, Tomoyuki Watanabe, Yoichi Kohno, Hiroshi Mochizuki, Geoffrey N. Hendy, David Goltzman, John H. White and Toshiyuki Yasuda

Department of Pediatrics, Chiba University School of Medicine (M.M., T.W., Y.K., T.Y.), Inohana, Chuo-ku, Chiba 260-8670, Japan; Division of Endocrinology and Metabolism, Saitama Children’s Medical Center (H.M.), Iwatsuki, Saitama 339-8551, Japan; Department of Physiology, McGill University (G.N.H., D.G., J.H.W.), Montréal, Québec, Canada H3G 1Y6; and Department of Medicine and Calcium Research Laboratory, McGill University (G.N.H., D.G.), and Royal Victoria Hospital, Montreal, Québec, Canada H3A 1A1

Address all correspondence and requests for reprints to: Toshiyuki Yasuda, M.D., Department of Pediatrics, Chiba University School of Medicine, 1-8-1 Inohana, Chuo-ku, Chiba 260-8670, Japan. E-mail: toshi{at}med.m.chiba-u.ac.jp

Abstract

Hypocalcemia and hyperphosphatemia caused by PTH resistance are the only discernible abnormalities in pseudohypoparathyroidism type 1b (PHP-1b). Because of the selective resistance toward PTH, inactivating mutations in its receptor, the PTH/PTH-related peptide receptor (PTHR1), were thought to be responsible for PHP-1b. However, gene abnormalities responsible for PHP-1b have not been identified in the coding region and well conserved promoters (P1 and P2) of the PTHR1 gene. The purpose of the present study was to analyze the structure of the P3 promoter, the main promoter of the human PTHR1 gene in kidney, in patients with PHP-1b. Southern analysis of genomic DNA from lymphoblastoid cell lines of eight nonfamilial patients with PHP-1b revealed neither gross rearrangements nor methylation abnormalities in the P3 promoter region of the PTHR1 gene. Sequencing revealed no abnormalities in the P3 promoter region, although one patient was homozygous for an (AAAG)n polymorphic variant.

In conclusion, despite the selective resistance toward PTH in the kidney, which mainly uses the PTHR1 P3 promoter, PHP-1b in eight cases is not associated with structural abnormalities in this promoter. This study also indicates that inactivation of the P3 promoter is not achieved by methylation as tested in patients’ genomic DNA from lymphoblastoid cell lines. The influence of alterations in the polymorphic A-rich repeat sequence on promoter activity warrants further study.

PSEUDOHYPOPARATHYROIDISM (PHP) type 1 is a group of disorders characterized by hypocalcemia and hyperphosphatemia despite high PTH levels, and patients with this condition fail to show an appropriate increase in urinary cAMP in response to exogenous PTH infusion. It is usually classified into two groups, PHP-1a and PHP-1b. Patients with PHP-1a have, in addition to PTH resistance, multiple hormone resistance and Albright’s hereditary osteodystrophy, manifested as short stature, brachydactyly and sc ossifications (1). PHP-1a is caused by maternally transmitted heterozygous inactivating mutations in the GNAS1 gene encoding the {alpha}-subunit of the stimulatory G protein (Gs{alpha}) (2), whereas the paternally transmitted condition termed pseudo-PHP shows Albright’s hereditary osteodystrophy without hypoparathyroidism. Gs{alpha} mutations lead to PTH resistance through loss of Gs{alpha} expression and thus explain at least partially the resistance toward PTH and other hormones that mediate their actions through G protein-coupled receptors. In contrast, hypocalcemia and hyperphosphatemia caused by PTH resistance are the only discernible abnormalities in PHP-1b. Because of the selective resistance toward only this hormone, inactivating mutations in the PTH/PTH-related peptide (PTHrP) receptor (PTHR1) could be responsible for PHP-1b. However, such mutations were excluded for all coding and noncoding exons of the PTHR1 gene (3, 4).

The PTHR1 belongs to the vast family of G protein- coupled receptors containing seven transmembrane domains (5). Binding of ligand can stimulate the production of intracellular cAMP and inositol 1,4,5-trisphosphate (6). Silve et al. (7) reported reduced levels of PTHR1 messenger ribonucleic acid (mRNA) in some patients with PHP-1b in skin fibroblast cells, suggesting an impairment in transcriptional regulation of the PTHR1 gene. We previously cloned the 5'-regulatory regions of the mouse (8, 9) and human PTHR1 genes, characterized well conserved promoters (P1 and P2; see Fig. 1Go), and examined the structure of both P1 and P2 promoters in genomic DNA from seven nonfamilial cases with PHP-1b. We found no structural abnormality in those regions (10).



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Figure 1. Schematic representation of the P3 promoter region of the human PTHR1 gene. The restriction sites for ApaI and HpaII (and MspI) and the expected fragment sizes produced by each of the restriction enzymes are shown. The PCR product covering the entire P3 promoter region and the probe used for Southern blot hybridization are shown. An A-rich sequence that suppresses promoter activity (11 ) is indicated, and U1, U2, U3, U4, and SS denote exons encoding 5'-untranslated regions 1, 2, 3, 4, and the signal sequence, respectively. The splicing patterns are indicated in the upper panel.

 
More recently, we identified a third promoter, P3, that is highly expressed in human, but not in mouse, kidney (11). The human P3 promoter is structurally similar to P2 containing a number of SP1 motifs and lies within the same CpG island. However, the two promoters are clearly regulated differently, as P2, but not P3 (or P1), is expressed during the midgestational period. Because the P3 promoter in the human PTHR1 gene is under distinct control from P2 and is the main promoter of the human kidney, we hypothesized that this region of the PTHR1 gene is a candidate for involvement in the pathogenesis of PHP-1b caused by reductions in PTHR1 mRNA. We found that PHP-1b in eight cases is not associated with structural abnormalities in this promoter and have identified an AAAG repeat polymorphism in this region.

Subjects and Methods

Patients and assay methods

The study subjects were eight Japanese PHP-1b patients, as shown in Table 1Go. Serum PTH was measured by a two-site immunoradiometric assay (Allegro intact PTH kit, Nichols Institute Diagnostics, San Juan Capistrano, CA) and/or by a midregion specific RIA (high sensitive PTH, Yamasa Shoyu Co. Ltd., Chiba, Japan). The diagnostic criteria of five patients were reported previously (10). All were apparently sporadic. In each case a careful family history was made. Normal serum calcium, phosphorus, and PTH levels of their siblings and parents were documented in all families. In the family of patient 4, normal serum calcium, phosphorus, and PTH levels were found in grandfathers and grandmothers of both sides and the patient’s two daughters. Lymphoblastoid cell lines derived from PHP-1b patients were established by Epstein-Barr virus transformation. All patients provided informed consent.


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Table 1. Clinical and biochemical features in eight patients with PHP-1b

 
Southern blot analysis of PHP1b patient genomic DNA

DNA was isolated from whole blood and lymphoblastoid cell lines using QIAGEN DNA kits (QIAGEN, Hilden, Germany). Ten micrograms of genomic DNA were digested to completion with ApaI, ApaI-HpaII, or ApaI-MspI restriction endonuclease under the conditions recommended by the supplier (New England Biolabs, Inc., Beverly, MA), electrophoresed on 2% agarose gels, and transferred to Hybond-N+ membrane (Amersham Pharmacia Biotech, Arlington Heights, IL). Genomic DNA in the P3 promoter region was detected by probing with a 32P-labeled 515-bp SmaI fragment extending from a naturally occurring SmaI site located 111 bp downstream of the 5'-P3 major transcription start site upstream to a second site representing the 5'-end of an exonuclease III digestion (see Fig. 1Go). Conditions for hybridization and autoradiography were described previously (12).

PCR amplification of PHP-1b patient genomic DNA and PCR-single strand conformation polymorphism (SSCP)

PCR was performed using 0.5 µg genomic DNA, 15 pmol of each primer, 200 mmol/L deoxy-NTPs, 1.5 mmol/L MgCl2, 1 x Expand HF buffer, and 2.6 U enzyme mix of Expand High Fidelity PCR System (Roche Molecular Biochemicals, Mannheim, Germany) in a total volume of 50 µL. PCR primers are designed to encompass the A-rich region and the minimal promoter region (see Fig. 1Go). The forward primer and reverse primer are: P3(-181), 5'-CGCGGATCCTGGGGCGAAGCCACAGCTCC-3'; and P3R(+205), 5'-GCTCTAGAGGGTGCAGAGCTGCGTCAGG-3', respectively (see Fig. 1Go; underlined sequences represent restriction enzyme sites added to facilitate subcloning). Samples were cycled at 95 C for 50 s, 69 C for 1 min, and 72 C for 1 min for 15 cycles, and then at 95 C for 50 s, 67 C for 1 min, and 72 C for 1 min and 15 s for 25 cycles, followed by 72 C for 10 min. For PCR-SSCP [32P]deoxy-CTP was added to the PCR reaction and electrophoresed on 5% glycerol containing 7% acrylamide gels, and the gels were subjected to autoradiography.

Sequencing

Amplified DNA fragments were purified with a QIA Quick-Gel extraction kit (QIAGEN). Nucleotide sequencing was performed using a mode 373A automated sequencer with a Taq DyeDeoxy terminator cycle sequencing kit (PE Applied Biosystems, Foster City, CA). PCR products that showed possible heterozygosity were subcloned into pBluescript SK- plasmid and sequenced with a T7 sequencing kit (Pharmacia Biotech, Uppsala, Sweden). At least six independent clones from each patient DNA were sequenced.

Results

Southern blot analysis of PHP-1b patient genomic DNA

The genomic DNAs of eight PHP-1b patients were compared with those of normal individuals using Southern blotting and hybridization with a PTHR1 P3 promoter-specific probe. ApaI digestion generated restriction fragments of 784 and 178 bp, as predicted from the map of the normal PTHR1 gene, and did not reveal any differences between samples (Fig. 2AGo). As the P3 promoter region lies within the GC-rich region, and methylation in this region reduces the promoter activity in vitro (12), digestion with either methylation- sensitive (HpaII; Fig. 2BGo) or methylation-insensitive (MspI; Fig. 2CGo) restriction enzymes was performed to explore differences in methylation state. Both Southern blots generated restriction fragments of approximately 209, 78, 89, and 99 bp in size, and the latter three fragments are identified as a single relatively broad band (Fig. 2Go, B and C; also see Fig. 1Go). None of the samples showed any difference between the two endonucleases (Fig. 2Go, B and C).



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Figure 2. Southern blot analysis of PHP1b patient genomic DNA. The genomic DNAs from lymphoblastoid cell lines of eight PHP-1b patients (lanes 1–8) were compared with those of normal subjects (N). Each number corresponds to the patient number in Table 1Go. The restriction enzymes used are: A, ApaI; B, ApaI and methylation-sensitive HpaII; and C, ApaI and methylation-insensitive MspI. The sizes of fragments predicted from the normal PTHR1 gene sequence are indicated. In B and C, fragments of approximately 78, 89, and 99 bp in size migrate as a single band. Southern blot analysis using leukocyte DNA gave the same results (data not shown).

 
PCR amplification of PHP-1b patient genomic DNA, PCR-SSCP, and sequencing

PCR amplification of PHP-1b patient genomic DNA and PCR-SSCP showed some different patterns in both patients and controls (data not shown), indicating that there may be some (sequence) differences between -181 and +205. PCR-direct sequencing revealed no difference in the sequence of minimal promoter region (between -115 and +63) of P3 (13). We originally reported that an A-rich region reduced P3 promoter activity (see Fig. 1Go) and had five repeats of AAAG (underlined in Fig. 3AGo) (11, 14, 15). A homozygous (AAAG)n repeat, where n = 6, was identified in patient 3 (Table 1Go and Fig. 3BGo); however, the unaffected mother had the same genotype, and the unaffected brother was heterozygous.



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Figure 3. Sequence of the homozygous (AAAG)6 polymorphism in patient 3. A, Sequence of the minimal P3 promoter and U4 region of PTHR1 gene, which covers the entire DNA sequence amplified by PCR from a normal individual. The (AAAG)5 sequence is underlined. B, The sequence of the homozygous (AAAG)6 polymorphism in patient 3 is shown.

 
Discussion

In previous studies mutations for all coding and noncoding exons of the PTHR1 gene were excluded as a cause of PHP-1b, and analysis of the receptor’s mRNA provided no evidence for splice variants (3, 4, 5). The homozygous loss of function in the PTHR1 in both mouse (13, 16, 17) and human (18, 19) induced lethal-type bone dysplasia, and the severity of symptoms manifested by loss of function of PTHR1 might also indicate that mutation of the PTHR1 is unlikely as the cause of PHP-1b. Taken together, all available data imply that PHP-1b is caused by a tissue- or cell-specific defect in PTHR1 expression or by a defect in a protein that mediates the PTH-dependent signaling events downstream. With respect to the tissue- or cell-specific defect in PTHR1 expression, an abnormality in the third promoter (P3) in the human PTHR1 gene that has recently been identified is a candidate for the cause of PHP-1b (11).

The P3 promoter consists of both GC-rich and A-rich regions, and the former may be subjected to methylation. We have previously shown that methylation of the P3 promoter abolished its promoter activity completely (12). We showed in this study that the P3 promoter is not methylated in normal subjects and PHP-1b patients. Thus, this is not likely to be the cause of renal resistance to PTH in these patients with PHP-1b, although we have not ruled out that there is kidney-specific methylation of the P3 promoter in them.

We examined the P3 promoter by PCR-SSCP and nucleotide sequencing. We have identified a homozygous AAAG repeat polymorphism in the A-rich area of P3 promoter in one patient with PHP-1b. Other sequences in the P3 promoter region, including the GC-rich region, did not vary between individuals. As we have previously shown that the deletion of this A-rich sequence increases promoter activity (14), this change may affect promoter activity. However, the same polymorphism was identified in normal subjects. A subsequent study revealed that there is an AAAG repeat polymorphism in this region, with the repeat ranging in number from three to eight in the Japanese population. Further studies will be required to elucidate the significance of this polymorphism. Jüppner et al. (20) conducted a genome-wide search with four familial PHP-1b kindreds and established linkage to a small telomeric region on chromosome 20q13.3 that overlaps the stimulatory G protein gene. In addition, in two PHP-1b families the PTHR1 gene was excluded as a candidate gene by linkage analysis (21). The PHP-1b patients examined in the present study were all sporadic cases, and as familial PHP-1b is extremely rare, it is possible that the cause of most sporadic PHP-1b is different from that of familial PHP-1b.

In summary, PHP-1b in eight cases is not associated with structural abnormalities in the PTHR1 P3 promoter, and its methylation status is not different in PHP-1b patients relative to that in normal subjects. The significance of an additional A-rich repeat on promoter activity warrants further study.

Footnotes

1 This work was supported by grants from the Japanese Ministry of Education, Science, and Culture (10670706 and 12670728); the Investigation Committee on Abnormalities in Hormone Reception Mechanism by the Japanese Ministry of Health and Welfare, and the Third and Fifth Novo Nordisk Awards. Back

Received August 9, 2000.

Revised October 24, 2000.

Revised December 1, 2000.

Accepted December 4, 2000.

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