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The Journal of Clinical Endocrinology & Metabolism Vol. 83, No. 3 1016-1019
Copyright © 1998 by The Endocrine Society


Original Studies

Mutation/Polymorphism Scanning of Glucose-6-Phosphatase Gene Promoter in Noninsulin-Dependent Diabetes Mellitus Patients1

Issei Yoshiuchi, Ryosuke Shingu, Hiromu Nakajima, Tomoya Hamaguchi, Yukio Horikawa, Tomoyuki Yamasaki, Takanori Oue, Akira Ono, Jun-ichiro Miyagawa, Mitsuyoshi Namba, Toshiaki Hanafusa and Yuji Matsuzawa

Second Department of Internal Medicine, Osaka University Medical School, 2–2 Yamadaoka, Suita, Osaka 565, Japan

Address all correspondence and requests for reprints to: Hiromu Nakajima, M.D., Ph.D., Second Department of Internal Medicine, Osaka University Medical School, 2–2 Yamadaoka, Suita, Osaka 565, Japan. E-mail: hinakaji{at}imed2.med.osaka-u.ac.jp


    Abstract
 Top
 Abstract
 Introduction
 Subjects and Methods
 Results
 Discussion
 References
 
Glucose-6-phosphatase (G6Pase) catalyzes the rate-limiting step of gluconeogenesis, and hepatic G6Pase activity is increased in diabetes. We have cloned and analyzed the human G6Pase gene promoter region and identified putative regulatory sequences for insulin, cAMP, glucocorticoid, and hepatocyte nuclear factors. The promoter region of the G6Pase gene was analyzed in 154 noninsulin-dependent diabetes mellitus patients and 90 control subjects by PCR-single strand conformation polymorphism and direct sequencing methods. Polymorphisms were not found in any subjects. The results suggested that in noninsulin-dependent diabetic patients, the major cause of the hepatic glucose overproduction was not attributed to dysregulation of the G6Pase gene due to mutation/polymorphism of its promoter region.


    Introduction
 Top
 Abstract
 Introduction
 Subjects and Methods
 Results
 Discussion
 References
 
NONINSULIN-DEPENDENT diabetes mellitus (NIDDM) is a genetically heterogeneous disorder caused by several metabolic defects in pancreatic ß-cells, muscle, adipocytes, and liver (1). Hepatic glucose production is increased in NIDDM patients and correlates positively with fasting glucose levels, which can be attributed to increased gluconeogenesis (2, 3). Thus, gluconeogenic enzymes are promising candidates for the diabetogenic genes. Recently, a key enzyme, phosphoenolpyruvate carboxykinase (PEPCK) gene promoter, has been examined in diabetic patients. However, no polymorphism was found (4). Glucose-6-phosphatase (G6Pase) also plays a major role in hepatic glucose production. The activity of G6Pase is regulated by various hormones, mainly at the transcriptional level (5, 6, 7). Insulin suppresses the activity by decreasing the amount of messenger ribonucleic acid of the catalytic subunit (8, 9, 10, 11, 12, 13). Glucagon, via cAMP, and glucocorticoids increase the activity of this enzyme. A search for a promoter mutation/polymorphism of G6Pase gene has not yet been conducted, and it may give some clues to the elucidation of abnormal hepatic glucose production in NIDDM patients. In this study, we screened NIDDM patients for the G6Pase promoter region, including putative insulin-responsive motifs, cAMP response elements (CREs), glucocorticoid response element (GRE), and hepatocyte nuclear factor (HNF)-binding sites.


    Subjects and Methods
 Top
 Abstract
 Introduction
 Subjects and Methods
 Results
 Discussion
 References
 
Subjects

Unrelated Japanese NIDDM patients (n = 154) and healthy control subjects (n = 90) participated in the study. NIDDM was diagnosed using WHO criteria (14). The healthy control subjects consisted of our department staff and hospital nurses, with normal hemoglobin A1c values and normal fasting plasma glucose concentrations (<110 mg/dL). Informed consent was obtained from the subjects. There were 17 patients with early-onset NIDDM and 137 patients with late-onset NIDDM. Early-onset NIDDM was diagnosed between 14–30 yr of age (mean ± SD, 22.7 ± 5.5; n = 17), with a body mass index of 22.9 ± 3.3 (range, 16.6–31.6). Late-onset NIDDM was diagnosed between 31–76 yr of age (46.5 ± 9.2; n = 137), with a body mass index of 22.5 ± 3.2 (range, 16.5–32.7). The 90 healthy control subjects ranged from 21–61 yr of age (37.5 ± 11.4), with a body mass index of 22.1 ± 2.7 (range, 18.0–28.7).

Isolation of the human G6Pase gene promoter region by inverse PCR

Primers were prepared according to the published complementary DNA sequence (15). EcoRI-digested human genomic DNA was circularized by T4-DNA ligase. By using the primers HG6P12 (5'-CTGGATCCCAAAGTCATGGAGAACATTC) and HG6P22 (5'-CCATGGGCACAGCAGGTGTATACTACG), PCR was performed so as to inversely amplify the upstream sequence of human G6Pase. An aliquot was subjected to the nested PCR using the primers HG6P1 (5'-CCTCATTTCCTTGGCACCTCAGGAAG) and HG6P2 (5'-GGTGTATACTACGTGATGGTCACATC). The amplicon was directly sequenced using the DNA sequencing kit (ABI Prism, Perkin Elmer/Applied Biosystems Division, Foster City, CA) on a model 310 Genetic Analyzer (Applied Biosystems, Norwalk, CT). The nucleotide sequence appears in DDBJ/EMBL/GenBank databases under accession number D87948.

PCR amplification of the human G6Pase gene promoter

We selected three regions to analyze all of the identified putative functional motifs. Region 1 was located at residues -357 to -1 containing three insulin response sequences (IRSs), three CREs, a GRE, and HNF-4-, HNF-3-, and HNF-1-binding sites; region 2 was located at residues -821 to -450 containing several insulin-responsive motifs and an HNF-3-binding site. Region 3 was the upstream sequence at residues -1160 to -838 containing a CRE. The primers used were designed as follows: for region 1, 5'-AGTGCAGTTGCAGGCATAG and 5'-GAGTCTGTGCCTTGCCCCTG; for region 2, 5'-GACCAGCAAGATGATAGTCCC and 5'-GCTCACACCTGTAATCCCAGC; and for re-gion 3, 5'-TAGCCAGGCATGGTGGCGTGTG and 5'-AGAGTCTAG-GGTCTGCCTCTG.

PCR was performed by denaturation for 1 min at 95 C, annealing for 30 sec at 61 C, and extension for 30 s at 72 C for 35 cycles. Mutagenized PCR were performed on 50 ng control human genomic DNA in 10 mmol/L Tris-HCl (pH 8.3), 50 mmol/L KCl, 7 mmol/L MgCl2, 0.01% gelatin, 0.2 mmol/L deoxy (d)-ATP and dGTP, 0.25 mmol/L dCTP and dTTP, 300 nmol/L primers, and 2.5 U AmpliTaq DNA polymerase (Applied Biosystems). Thermal cycling was performed by denaturation for 1 min at 95 C, annealing for 1 min at 58 C, and extension for 1 min at 72 C, for 35 cycles. The amplicon was subcloned into pUC119 and sequenced. At least seven clones with one- to three-base substitutions were selected as mutagenized clones for each region, which were used to optimize the experimental conditions.

Single strand conformation polymorphism (SSCP) analysis

Samples were heat denatured in 96% formamide at 95 C for 5 min and separated through 5–10% gradient polyacrylamide gels (Ready Gels-J, Bio-Rad, Richmond, CA) in Tris-glycine buffer (25 mmol/L Tris-HCl, pH 8.3, and 192 mmol/L glycine). Gel running conditions were optimized by changing the temperature in increments of 2 or 3° from 7 to 42 C with or without 10% glycerol. The best results were obtained by electrophoresis with constant power of 20 watts for 75 min at 7 C and for 60 min at 37 C with 10% glycerol for region 1, for 75 min at 9 C and for 60 min at 30 C with 10% glycerol for region 2, and for 75 min at 7 C and for 60 min at 30 C with 10% glycerol for region 3. Nine of nine (regions 1 and 2) and six of seven (region 3) mutagenized clones were distinguished. Gels were stained by SYBR Green I Nucleic Acid Gel Stains (FMC BioProduct, Rockland, ME) followed by laser excitation fluorescent image analysis (Fluor Image Analyzer SI and Image QuaNT, Molecular Dynamics, Sunnyvale, CA).


    Results
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 Abstract
 Introduction
 Subjects and Methods
 Results
 Discussion
 References
 
The inverse PCR product [1.8 kilobases (kb)] yielded restriction fragments of 1.4 and 0.4 kb with EcoRI, which are compatible to the size expected from the reported physical map of the human G6Pase gene (16). The longer fragment contained 1,214 bp of the 5'-upstream region of the human G6Pase gene. This sequence had an insertion of a thymine at -914 compared to that in a previous report (17). A racial polymorphism may exist, as all Japanese subjects sequenced (>100 alleles; data not shown) possessed the insertion. Putative binding sites for transcription factors were identified within this sequence. Two insulin response elements (IREs) (18), located from -633 to -626 and from -491 to -484, and two clusters of IRSs [T(G/A)TTTTG] (19) from -768 to -726 and from -186 to -158 existed. Five potential CREs (20) were also found. A sequence of GRE, a HNF-1-binding site, a HNF-4 binding site, and two HNF-3-binding sites were identified using the computer search program Search TRANSFAC database (http://www.genome.ad.jp/), which is the combination of TFFACTOR and TFSITE release 3.0 (Fig. 1Go).



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Figure 1. Nucleotide sequence of the cloned 5'-flanking region of the human glucose-6-phosphatase gene. The transcription start site is indicated as +1. Putative binding sites for transcription factors are underlined. A double underline at -914 shows an insertion of a thymine compared to a previous report (17). IRS (-), complementary to IRS; HNF-1, -3, and -4, HNF-1-, -3-, and -4-binding sites; C/EBP, CCAAT/enhancer binding protein; TATA, TATA box.

 
No conformation polymorphism was identified in any subject under optimal SSCP conditions for the three regions. Moreover, direct sequencing of regions 1 and 3 failed to reveal any polymorphism in the 100 alleles of the additional 50 NIDDM patients. To test the other CRE within exon 1, the primer HG6P12 was used to amplify the fragment between -357 to +120. No polymorphism was found in this CRE by sequencing 50 patients.


    Discussion
 Top
 Abstract
 Introduction
 Subjects and Methods
 Results
 Discussion
 References
 
Promoter mutations have been shown to be pathogenic in patients with retinoblastoma and ß-thalassemia (21). Recently, promoter polymorphism of the stromelysin-1 gene has been shown to be closely associated with atherosclerosis (22). The liver-type and the ß-cell-type glucokinase promoter variations are associated with insulin resistance and impaired insulin secretion, respectively (23, 24). In contrast, mutations were clinically silent in the promoters of insulin, GLUT4, and PEPCK genes (4, 25, 26). The sensitivity of identifying point mutations with SSCP varies according to the gel conditions and DNA length and sequence (27, 28). Nonisotopic SSCP in the minigel format was reported to be capable of detecting over 90% of point mutations with only one gel condition (29, 30). Our strategy was to determine the electrophoretic conditions by using mutagenized clones. At least 96% of the mutagenized sequences were distinguished by the optimized conditions. We may have missed less than 1 in 154 patients.

DNA sequences that transduce some insulin signals have been proposed as IRE in glyceraldehyde-3-phosphate dehydrogenase (CCCGCCTC) (18) and microsomal triglyceride transfer protein (AGCCCACCTACG) (31) genes. IRS [T(G/A)TTTTG] was also identified in PEPCK (19) and insulin-like growth factor-binding protein-1 (32) genes. In the rat G6Pase gene 5'-flanking region, the TAAAACACCA motif complementary to IRS was identified 1.5 kb upstream from the transcription start site (33). Very recently, the mouse G6Pase promoter region between -198 and -159 has been shown to contain an IRS that could confer an inhibitory transcriptional effect by insulin using the reporter assays (34). Among several IRS motifs, as determined in this study, the IRS cluster of -186 to -158 may be the human counterpart, which contributes to the insulin responsiveness.

Susceptibility to NIDDM can be conferred by multiple and heterogeneous genetic defects. As partly shown in the experimental animal studies (13, 35), decreased responsiveness to insulin and/or exaggerated sensitivity to glucocorticoids and cAMP in the gluconeogenic system can increase hepatic glucose production. Therefore, gluconeogenic enzyme gene promoters can be good candidates for diabetogenic genes. We have extensively searched for the genetic variation of human G6Pase gene promoter. However, we did not find any polymorphism in the patients or the control subjects. The frequency of promoter mutation/polymorphism of G6Pase gene is thus very low. The molecular mechanism of the hepatic glucose overproduction in NIDDM needs to be further elucidated.


    Footnotes
 
1 This work was supported in part by a grant-in-aid from the Ministry of Education, Science, and Culture, and grants from the Inamori Foundation, the Senri Lifescience Foundation, the Tanabe Medical Frontier Conference, the Japan Diabetes Federation, and the Yamanouchi Foundation for Metabolic Disorders. Back

Received August 29, 1997.

Revised October 30, 1997.

Accepted December 2, 1997.


    References
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 Abstract
 Introduction
 Subjects and Methods
 Results
 Discussion
 References
 

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